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\chapter{Software}
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\chapter{Software}
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\label{tools}
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\label{tools}
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During the development of the HelenOS operating system, we came across
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During the development of the HelenOS operating system, we came across
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several types of software tools, programs, utilities and libraries.
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several types of software tools, programs, utilities and libraries.
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Some of the tools were used to develop the system itself while other tools
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Some of the tools were used to develop the system itself while other tools
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were used to faciliate the development process. In some cases, we had a chance
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were used to faciliate the development process. In some cases, we had a chance
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to try out several versions of the same product. Sometimes the new versions
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to try out several versions of the same product. Sometimes the new versions
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contained fixes for bugs we had discovered in previous versions thereof.
9
contained fixes for bugs we had discovered in previous versions thereof.
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Another group of software we have used has been integrated into HelenOS
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Another group of software we have used has been integrated into HelenOS
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to fill gaps after functionality that the genuine HelenOS code did
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to fill gaps after functionality that the genuine HelenOS code did
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not provide itself.
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not provide itself.
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There is simply too much third party software that is somehow related to
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There is simply too much third party software that is somehow related to
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HelenOS to be covered all. This chapter attempts to present our experience
16
HelenOS to be covered all. This chapter attempts to present our experience
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with the key softare tools, programs and libraries.
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with the key softare tools, programs and libraries.
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\section{Communication tools}
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\section{Communication tools}
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Although the developers know each other in person, the development, with the
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Although the developers know each other in person, the development, with the
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exception of kernel camps, has been pretty much independent as far as locality
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exception of kernel camps, has been pretty much independent as far as locality
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and time goes. In order to work effectively, we have established several communication
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and time goes. In order to work effectively, we have established several communication
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channels:
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channels:
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\begin{description}
25
\begin{description}
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\item [E-mail] --- We used this basic means of electronic communication for peer-to-peer
26
\item [E-mail] --- We used this basic means of electronic communication for peer-to-peer
27
discussion in cases when the other person could not have been reached on-line at
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discussion in cases when the other person could not have been reached on-line at
28
the time his advice was needed or his attention was demanded. E-mail was also
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the time his advice was needed or his attention was demanded. E-mail was also
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used for contacting developers of third party software that we needed to talk to.
29
used for contacting developers of third party software that we needed to talk to.
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30
 
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\item [Mailing list] --- As almost every open source project before us, also we opened
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\item [Mailing list] --- As almost every open source project before us, also we opened
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mailing list for technical discussion. The advantage of having a mailing list is
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mailing list for technical discussion. The advantage of having a mailing list is
33
the fact that it enables multilateral discussions on several topics contemporarily,
33
the fact that it enables multilateral discussions on several topics contemporarily,
34
without the need for all the participants be on-line or even at one place. We have kept
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without the need for all the participants be on-line or even at one place. We have kept
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our first development mailing list closed to public so that it seemed natural to us
35
our first development mailing list closed to public so that it seemed natural to us
36
to use Czech as our communication language on the list since Czech, with one exception,
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to use Czech as our communication language on the list since Czech, with one exception,
37
is our native language and all of us speak it very well. Besides all the advantages,
37
is our native language and all of us speak it very well. Besides all the advantages,
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there are also disadvantages. First, communication over mailing list tends to be rather
38
there are also disadvantages. First, communication over mailing list tends to be rather
39
slow, compared for instance to ICQ. Second, because of its implicit collective nature,
39
slow, compared for instance to ICQ. Second, because of its implicit collective nature,
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it sometimes tends to be so slow that an answer for a given question never comes.
40
it sometimes tends to be so slow that an answer for a given question never comes.
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41
 
42
Apart from the internal development mailing list, we have also used another mailing list
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Apart from the internal development mailing list, we have also used another mailing list
43
for commit log messages which proved handy in keeping developers informed about all changes in
43
for commit log messages which proved handy in keeping developers informed about all changes in
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the repository.
44
the repository.
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46
Finally, we have also established a public mailing list for communication
46
Finally, we have also established a public mailing list for communication
47
about general HelenOS topics in English.
47
about general HelenOS topics in English.
48
 
48
 
49
\item [ICQ] --- Because we divided the whole project into smaller subprojects on which
49
\item [ICQ] --- Because we divided the whole project into smaller subprojects on which
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only the maximum of two people out of six would work together, the need for communication
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only the maximum of two people out of six would work together, the need for communication
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among all six people was significantly smaller than the need to communicate between the two
51
among all six people was significantly smaller than the need to communicate between the two
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developers who tightly cooperated on a specific task. For this reason, we made the biggest
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developers who tightly cooperated on a specific task. For this reason, we made the biggest
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use of ICQ.
53
use of ICQ.
54
\end{description}
54
\end{description}
55
 
55
 
56
\section{Concurrent versions systems}
56
\section{Concurrent versions systems}
57
At the very beginning, when the SPARTAN kernel was being developed solely
57
At the very beginning, when the SPARTAN kernel was being developed solely
58
by \JJ, there was not much sence in using any software for management of
58
by \JJ, there was not much sence in using any software for management of
59
concurrent versions. However, when the number of developers increased to six,
59
concurrent versions. However, when the number of developers increased to six,
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we immediately started to think of available solutions.
60
we immediately started to think of available solutions.
61
 
61
 
62
We have begun with CVS because it is probably the best known file concurrent
62
We have begun with CVS because it is probably the best known file concurrent
63
versions system. We have even had repository of HelenOS using CVS for a short time,
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versions system. We have even had repository of HelenOS using CVS for a short time,
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but when we learned about its weaknesses we sought another solution. There are two
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but when we learned about its weaknesses we sought another solution. There are two
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weaknesses that have prevented us from using CVS:
65
weaknesses that have prevented us from using CVS:
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66
 
67
\begin{itemize}
67
\begin{itemize}
68
\item it is merely a file concurrent versions system (i.e. CVS is
68
\item it is merely a file concurrent versions system (i.e. CVS is
69
good at managing versions of each separate file in the repository
69
good at managing versions of each separate file in the repository
70
but has no clue about the project's directory tree as a whole;
70
but has no clue about the project's directory tree as a whole;
71
specifically renaming of a file while preserving its revision history
71
specifically renaming of a file while preserving its revision history
72
is next to impossible),
72
is next to impossible),
73
 
73
 
74
\item it lacks atomic commits (i.e. should your commit conflict with
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\item it lacks atomic commits (i.e. should your commit conflict with
75
another recent commit of another developer, CVS would not abort the whole operation
75
another recent commit of another developer, CVS would not abort the whole operation
76
but render the repository inconsistent instead).
76
but render the repository inconsistent instead).
77
\end{itemize}
77
\end{itemize}
78
 
78
 
79
Being aware of these limitations, we decided to go with Subversion. Subversion
79
Being aware of these limitations, we decided to go with Subversion. Subversion
80
is, simply put, a redesigned CVS with all the limitations fixed. We were
80
is, simply put, a redesigned CVS with all the limitations fixed. We were
81
already familiar with CVS so the switch to Subversion was pretty seamless.
81
already familiar with CVS so the switch to Subversion was pretty seamless.
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82
 
83
As for Subversion itself, it has worked for us well and has met all our
83
As for Subversion itself, it has worked for us well and has met all our
84
expectations. Despite all its pros, there was a serious problem that
84
expectations. Despite all its pros, there was a serious problem that
85
occurred sometime in the middle of the development process. Because of some locking
85
occurred sometime in the middle of the development process. Because of some locking
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issues related to the default database backend (i.e. {\tt Berkeley DB}),
86
issues related to the default database backend (i.e. {\tt Berkeley DB}),
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our Subversion repository put itself in a peculiar state in which it became
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our Subversion repository put itself in a peculiar state in which it became
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effectivelly inaccessible by any means of standard usage or administration.
88
effectivelly inaccessible by any means of standard usage or administration.
89
To mitigate this problem, we had to manually delete orphaned file locks
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To mitigate this problem, we had to manually delete orphaned file locks
90
and switch to backend called {\tt fsfs} which doesn't suffer this
90
and switch to backend called {\tt fsfs} which doesn't suffer this
91
problem.
91
problem.
92
 
92
 
93
Other than that, we are happy users of Subversion. The ability to switch
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Other than that, we are happy users of Subversion. The ability to switch
94
the entire working copy to particular revision is a great feature
94
the entire working copy to particular revision is a great feature
95
for debugging. Once we tracked a bug three months into the past by
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for debugging. Once we tracked a bug three months into the past by
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moving through revisions until we found the change that caused the bug.
96
moving through revisions until we found the change that caused the bug.
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97
 
98
\section{Web tools}
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\section{Web tools}
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On our project website\cite{helenos}, we provided links to different
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On our project website\cite{helenos}, we provided links to different
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web utilities that either functioned to access our Subversion repository
100
web utilities that either functioned to access our Subversion repository
101
or mailing list or provided another services:
101
or mailing list or provided another services:
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102
 
103
\begin{description}
103
\begin{description}
104
\item [Chora] is a part of the Horde framework and can be used to comfortably
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\item [Chora] is a part of the Horde framework and can be used to comfortably
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browse Subversion repository from the web. We altered it a little bit to also
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browse Subversion repository from the web. We altered it a little bit to also
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show number of commits per developer on our homepage.
106
show number of commits per developer on our homepage.
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107
 
108
\item [WHUPS] is another component of the Horde framework. It provides
108
\item [WHUPS] is another component of the Horde framework. It provides
109
feature request and bug tracking features. However, in the light of being rather
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feature request and bug tracking features. However, in the light of being rather
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closed group of people, we used this tool only seldomly. On the other hand,
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closed group of people, we used this tool only seldomly. On the other hand,
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any possible beta tester of our operating system has had a chance to
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any possible beta tester of our operating system has had a chance to
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submit bug reports.
112
submit bug reports.
113
 
113
 
114
\item [Mailman] is a web interface to the mailing list we utilized. It allows
114
\item [Mailman] is a web interface to the mailing list we utilized. It allows
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to control subsriptions and search mailing list archives on-line.
115
to control subsriptions and search mailing list archives on-line.
116
\end{description}
116
\end{description}
117
 
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118
\section{Third party components of HelenOS}
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\section{Third party components of HelenOS}
119
HelenOS itself contains third party software. In the first place, amd64 and ia32 architectures
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HelenOS itself contains third party software. In the first place, amd64 and ia32 architectures
120
make use of GNU Grub boot loader. This software replaced the original limited boot loader
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make use of GNU Grub boot loader. This software replaced the original limited boot loader
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after the Kernel Camp 2005 when {\MD} had made HelenOS Multiboot specification compliant. Because of
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after the Kernel Camp 2005 when {\MD} had made HelenOS Multiboot specification compliant. Because of
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Grub, HelenOS can be booted from several types of devices. More importantly, we use
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Grub, HelenOS can be booted from several types of devices. More importantly, we use
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Grub to load HelenOS userspace modules as well.
123
Grub to load HelenOS userspace modules as well.
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124
 
125
Another third-party piece of the HelenOS operating system is the userspace {\tt malloc()}.
125
Another third-party piece of the HelenOS operating system is the userspace {\tt malloc()}.
126
Rather than porting our kernel slab allocator to userspace, we have chosen Doug Lea's public
126
Rather than porting our kernel slab allocator to userspace, we have chosen Doug Lea's public
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domain {\tt dlmalloc} instead. This allocator could be easily integrated into our uspace tree
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domain {\tt dlmalloc} instead. This allocator could be easily integrated into our uspace tree
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and has proven itself in other projects as well. Its derivative, {\tt ptmalloc}, has been part of the
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and has proven itself in other projects as well. Its derivative, {\tt ptmalloc}, has been part of the
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GNU C library for some time. However, the version we are using is not optimized for SMP and multithreading.
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GNU C library for some time. However, the version we are using is not optimized for SMP and multithreading.
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We plan to eventually replace it with another allocator.
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We plan to eventually replace it with another allocator.
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132
\section{Build tools}
132
\section{Build tools}
133
Assembler, linker and compiler are by all means the very focal point of attention
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Assembler, linker and compiler are by all means the very focal point of attention
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of all operating system projects. Quality of these tools influences
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of all operating system projects. Quality of these tools influences
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operating system performance and, what is more important, stability. HelenOS has
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operating system performance and, what is more important, stability. HelenOS has
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been tailored to build with GNU {\tt binutils} (i.e. the assembler and linker) and GNU~{\tt gcc}
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been tailored to build with GNU {\tt binutils} (i.e. the assembler and linker) and GNU~{\tt gcc}
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(i.e. the compiler). There is only little chance that it could be compiled and
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(i.e. the compiler). There is only little chance that it could be compiled and
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linked using some other tools unless those tools are compatible with the GNU build tools.
138
linked using some other tools unless those tools are compatible with the GNU build tools.
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139
 
140
As our project declares support for five different processor architectures,
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As our project declares support for five different processor architectures,
141
we needed to have five different flavors of the build utilities installed.
141
we needed to have five different flavors of the build utilities installed.
142
Interestingly, flavors of {\tt binutils} and {\tt gcc} for particular architecture
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Interestingly, flavors of {\tt binutils} and {\tt gcc} for particular architecture
143
are not equal from the point of view of cross-binutils and cross-compiler installation.
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are not equal from the point of view of cross-binutils and cross-compiler installation.
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All platforms except ia64 require only the {\tt binutils} package and the {\tt gcc} package
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All platforms except ia64 require only the {\tt binutils} package and the {\tt gcc} package
145
for the cross-tool to be built. On the other hand, ia64 requires also some excerpts from
145
for the cross-tool to be built. On the other hand, ia64 requires also some excerpts from
146
the ia64-specific part of {\tt glibc}.
146
the ia64-specific part of {\tt glibc}.
147
 
147
 
148
Formerly, the project could be compiled with almost any version of {\tt binutils} starting with 2.15
148
Formerly, the project could be compiled with almost any version of {\tt binutils} starting with 2.15
149
and {\tt gcc} starting with 2.95, but especially after we added partial thread local storage
149
and {\tt gcc} starting with 2.95, but especially after we added partial thread local storage
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support into our userspace layer, some architectures (e.g. mips32) will not compile even with {\tt gcc} 4.0.1
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support into our userspace layer, some architectures (e.g. mips32) will not compile even with {\tt gcc} 4.0.1
151
and demand {\tt gcc} 4.1.0. Curiously, ia64 will not link when compiled with {\tt gcc} 4.1.0.
151
and demand {\tt gcc} 4.1.0. Curiously, ia64 will not link when compiled with {\tt gcc} 4.1.0.
152
 
152
 
153
As for the mips32 cross-compiler, {\OP} discovered a bug in {\tt gcc} (ticket \#23824) which caused {\tt gcc} to
153
As for the mips32 cross-compiler, {\OP} discovered a bug in {\tt gcc} (ticket \#23824) which caused {\tt gcc} to
154
incorrectly generate unaligned data access instructions (i.e. {\tt lwl}, {\tt lwr}, {\tt swl} and {\tt swr}).
154
incorrectly generate unaligned data access instructions (i.e. {\tt lwl}, {\tt lwr}, {\tt swl} and {\tt swr}).
155
 
155
 
156
As for the mips32 cross-binutils\footnote{It remains uninvestigated whether this problem also shows with other cross-tools.},
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As for the mips32 cross-binutils\footnote{It remains uninvestigated whether this problem also shows with other cross-tools.},
157
we observed that undefined symbols are not reported when we don't link using the standard target. We are still not
157
we observed that undefined symbols are not reported when we don't link using the standard target. We are still not
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sure whether this was a bug --- {\tt binutils} developers just told us to use the standard target and then use
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sure whether this was a bug --- {\tt binutils} developers just told us to use the standard target and then use
159
{\tt objcopy} to convert the ELF binary into requested output format.
159
{\tt objcopy} to convert the ELF binary into requested output format.
160
 
160
 
161
\section{Virtual environments}
161
\section{Virtual environments}
162
After the build tools, simulators, emulators and virtualizers were the second focal point
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After the build tools, simulators, emulators and virtualizers were the second focal point
163
in our project. These invaluable programs really sped the code-compile-test cycle.
163
in our project. These invaluable programs really sped the code-compile-test cycle.
164
In some cases, they were, and still are, the only option to actually run HelenOS on certain
164
In some cases, they were, and still are, the only option to actually run HelenOS on certain
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processor architectures, because real hardware was not available to us. Using virtual environment
165
processor architectures, because real hardware was not available to us. Using virtual environment
166
for developing our system provided us with deterministic environment on wich it is much easier to do
166
for developing our system provided us with deterministic environment on wich it is much easier to do
167
troubleshooting. Moreover, part of the simulators featured integrated debugging facilities.
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troubleshooting. Moreover, part of the simulators featured integrated debugging facilities.
168
Without them, a lot of bugs would remain unresolved or even go unnoticed.
168
Without them, a lot of bugs would remain unresolved or even go unnoticed.
169
 
169
 
170
From one point of view, we have tested our system on eight different virtual environments:
170
From one point of view, we have tested our system on eight different virtual environments:
171
 
171
 
172
\begin{itemize}
172
\begin{itemize}
173
\item Bochs,
173
\item Bochs,
174
\item GXemul,
174
\item GXemul,
175
\item msim,
175
\item msim,
176
\item PearPC,
176
\item PearPC,
177
\item QEMU,
177
\item QEMU,
178
\item Simics,
178
\item Simics,
179
\item Ski,
179
\item Ski,
180
\item VMware.
180
\item VMware.
181
\end{itemize}
181
\end{itemize}
182
 
182
 
183
From the second point of view, we have tested these programs by our operating system.
183
From the second point of view, we have tested these programs by our operating system.
184
Because of the scope and uniqueness of this testing and because we did find some issues,
184
Because of the scope and uniqueness of this testing and because we did find some issues,
185
we want to dedicate some more space to what we have found.
185
we want to dedicate some more space to what we have found.
186
 
186
 
187
\subsection{Bochs}
187
\subsection{Bochs}
188
Bochs has been used to develop the SPARTAN kernel since its beginning in 2001.
188
Bochs has been used to develop the SPARTAN kernel since its beginning in 2001.
189
It is capable of emulating ia32 machine and for some time also amd64.
189
It is capable of emulating ia32 machine and for some time also amd64.
190
Bochs is an emulator and thus the slowest from virtual environments capable
190
Bochs is an emulator and thus the slowest from virtual environments capable
191
of simulating the same cathegory of hardware. On the other hand, it is extremely
191
of simulating the same cathegory of hardware. On the other hand, it is extremely
192
portable, compared to much faster virtualizers and emulators using dynamic translation
192
portable, compared to much faster virtualizers and emulators using dynamic translation
193
of instructions. Lately, there have been some plans to develop or port dynamic translation
193
of instructions. Lately, there have been some plans to develop or port dynamic translation
194
to Bochs brewing in its developer community.
194
to Bochs brewing in its developer community.
195
 
195
 
196
The biggest virtue of Bochs is that it has traditionally supported SMP. For some time, Bochs
196
The biggest virtue of Bochs is that it has traditionally supported SMP. For some time, Bochs
197
has been our only environment on wich we could develop and test SMP code. Unfortunatelly,
197
has been our only environment on wich we could develop and test SMP code. Unfortunatelly,
198
the quality of SMP support in Bochs was different from version to version. Because of SMP
198
the quality of SMP support in Bochs was different from version to version. Because of SMP
199
breakage in Bochs, we had to avoid some versions thereof. So far, Bochs versions 2.2.1 and 2.2.6
199
breakage in Bochs, we had to avoid some versions thereof. So far, Bochs versions 2.2.1 and 2.2.6
200
have been best in this regard.
200
have been best in this regard.
201
 
201
 
202
Our project has not only used Bochs. We also helped to identify some SMP related problems
202
Our project has not only used Bochs. We also helped to identify some SMP related problems
203
and {\OP} from our team has discovered and also fixed a bug in FXSAVE and FXRSTOR emulation
203
and {\OP} from our team has discovered and also fixed a bug in FXSAVE and FXRSTOR emulation
204
(patch \#1282033).
204
(patch \#1282033).
205
 
205
 
206
Bochs has some debugging facilities but those have been very impractical and broken
206
Bochs has some debugging facilities but those have been very impractical and broken
207
in SMP mode.
207
in SMP mode.
208
 
208
 
209
\subsection{GXemul}
209
\subsection{GXemul}
210
GXemul is an emulator of several processor architectures. Nevertheless, we have
210
GXemul is an emulator of several processor architectures. Nevertheless, we have
211
used it only for mips32 emulation in both little-endian and big-endian modes.
211
used it only for mips32 emulation in both little-endian and big-endian modes.
212
It seems to be pretty featurefull and evolving but we don't use all its functionality.
212
It seems to be pretty featurefull and evolving but we don't use all its functionality.
213
GXemul is very user friendly and has debugging features. It is more realistic
213
GXemul is very user friendly and has debugging features. It is more realistic
214
than msim. However, our newly introduced TLS support triggered a bug in the {\tt rdhwr}
214
than msim. However, our newly introduced TLS support triggered a bug in the {\tt rdhwr}
215
instruction emulation while msim functioned as expected. Fortunatelly, the author
215
instruction emulation while msim functioned as expected. Fortunatelly, the author
216
of GXemul is very cooperative and has fixed the problem for future versions as well as
216
of GXemul is very cooperative and has fixed the problem for future versions as well as
217
provided a quick hack for the old version.
217
provided a quick hack for the old version.
218
 
218
 
219
\subsection{msim}
219
\subsection{msim}
220
msim has been our first mips32 simulator. It simulates 32-bit side of R4000 processor.
220
msim has been our first mips32 simulator. It simulates 32-bit side of R4000 processor.
221
Its simulated environment is not very realistic, but the processor simulation
221
Its simulated environment is not very realistic, but the processor simulation
222
is good enough for operating system development. In this regard, the simulator is
222
is good enough for operating system development. In this regard, the simulator is
223
comparable to HP's ia64 simulator Ski. Another similar aspect of these two is
223
comparable to HP's ia64 simulator Ski. Another similar aspect of these two is
224
relatively strong debugger.
224
relatively strong debugger.
225
 
225
 
226
Msim has been developed on the same alma mater as our own project.
226
Msim has been developed on the same alma mater as our own project.
227
All members of our team know this program from operating system courses.
227
All members of our team know this program from operating system courses.
228
Curiously, this simulator contained the biggest number of defects and inaccuracies
228
Curiously, this simulator contained the biggest number of defects and inaccuracies
229
that we have ever discovered in a simulator.  Fortunately, all of them have been
229
that we have ever discovered in a simulator.  Fortunately, all of them have been
230
eventually fixed.
230
eventually fixed.
231
 
231
 
232
\subsection{PearPC}
232
\subsection{PearPC}
233
PearPC is the only emulator on wich we have run ppc32 port of HelenOS. It has
233
PearPC is the only emulator on wich we have run ppc32 port of HelenOS. It has
234
no debugging features, but fortunatelly its sources are available under
234
no debugging features, but fortunatelly its sources are available under
235
an open source license. This enabled {\OP} and {\MD} to alter its sources
235
an open source license. This enabled {\OP} and {\MD} to alter its sources
236
in a way that this modified version allowed some basic debugging.
236
in a way that this modified version allowed some basic debugging.
237
 
237
 
238
\subsection{QEMU}
238
\subsection{QEMU}
239
QEMU emulates several processor architectures. We have used it to emulate
239
QEMU emulates several processor architectures. We have used it to emulate
240
ia32 and amd64. It can simulate SMP, but contrary to Bochs, it uses dynamic
240
ia32 and amd64. It can simulate SMP, but contrary to Bochs, it uses dynamic
241
translation of emulated instructions and performs much better because of
241
translation of emulated instructions and performs much better because of
242
that.
242
that.
243
 
243
 
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This emulator seemed to realistically emulate the {\tt hlt} instruction,
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which was nice for those of us who use notebooks as their development
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machine.
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\subsection{Simics}
248
\subsection{Simics}
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Simics simulator can be compared to a Swiss-army knife for operating system debugging.
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This proprietary piece of software was available to us under an academic license for free.
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Simics can be set to simulate many different configurations of many different machines.
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It has the most advanced debugging features we have ever seen. To highlight some, its
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memory access tracing ability has been really helpfull to us. During device driver
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development, we appreciated the possibility to turn logging of the devices to a specified
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verbosity.
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We used it to test and develop amd64 and ia32 architectures in SMP mode and mips32 architecture in UP mode.
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Regardless of its invaluable qualities, it has still contained bugs. One of the most
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serious was bug with ticket \#3351. {\OP} discovered that its BIOS rewrites kernel memory
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during application processors start. Another bugs found were related to amd64 and mips32.
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As for amd64, Simics did not report general protection fault when {\tt EFER.NXE} was 0 and a non-executable
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page was found (\#4214). As for mips32, Simics misemulated {\tt MSUB} and {\tt MSUBU} instructions.
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\subsection{Ski}
266
\subsection{Ski}
246
\subsection{VMware}
267
\subsection{VMware}
247
 
268
 
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\section{Authoring tools}
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\section{Authoring tools}
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